Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010077.1 Corchorus capsularis cultivar CVL-1 contig10098, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17761

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2889--2964
28
2.6
30
81
10
102
28
28
13
28
1.94
2889--2992
31
3.5
29
78
12
97
25
26
14
32
1.95
3060--3136
29
2.5
31
81
6
95
29
12
28
28
1.94
9097--9124
2
14.0
2
100
0
56
50
0
0
50
1.00
10137--10177
21
2.0
21
85
9
57
53
7
14
24
1.66
10221--10259
14
2.8
13
88
11
51
0
15
0
84
0.62
10225--10251
8
3.4
8
100
0
54
0
11
0
88
0.50
11910--11947
14
2.7
14
87
0
58
0
21
2
76
0.91
12488--12545
22
2.6
22
83
2
71
67
1
5
25
1.21

Tables:   1

The End!