Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010087.1 Corchorus capsularis cultivar CVL-1 contig10108, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  50708

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
133--170
17
2.2
17
90
9
60
42
0
0
57
0.98
2833--2876
20
2.2
20
95
0
79
25
6
22
45
1.77
6547--6686
67
2.1
67
97
0
262
26
35
20
17
1.95
7418--7469
25
2.1
25
100
0
104
30
19
15
34
1.93
21415--21444
15
2.0
15
100
0
60
53
6
20
20
1.67
24536--24578
21
2.0
21
100
0
86
44
18
0
37
1.50
24735--24772
11
3.5
11
89
10
51
39
0
2
57
1.12
26335--26363
2
14.5
2
100
0
58
48
0
0
51
1.00
34594--34634
21
2.0
20
86
9
57
24
24
2
48
1.63
36431--36462
2
16.5
2
93
6
57
53
0
0
46
1.00
38262--38295
14
2.7
12
83
16
50
44
8
32
14
1.76
38264--38289
7
3.7
7
100
0
52
42
11
30
15
1.82
47092--47125
16
2.1
16
88
0
50
11
26
5
55
1.58
47170--47276
53
2.0
53
96
0
196
42
11
6
39
1.66
47240--47269
14
2.1
14
93
0
51
36
10
6
46
1.64
49112--49174
32
2.0
32
84
9
85
25
31
15
26
1.96

Tables:   1

The End!