Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010090.1 Corchorus capsularis cultivar CVL-1 contig10111, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31786

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4256--4324
26
2.7
26
76
17
72
36
0
2
60
1.11
5856--5888
16
2.1
16
94
0
57
12
15
15
57
1.65
18190--18310
52
2.3
52
85
12
153
61
8
21
9
1.52
19536--19578
21
2.0
21
81
0
50
37
9
11
41
1.74
20683--20707
3
8.3
3
100
0
50
64
0
0
36
0.94
22390--22436
14
3.1
15
79
11
51
57
0
29
12
1.36

Tables:   1

The End!