Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010091.1 Corchorus capsularis cultivar CVL-1 contig10112, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  77802

Tables:   1   

This is table  1  of  1  ( 20 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
755--854
48
2.1
48
98
0
191
50
15
10
25
1.74
1294--2133
438
1.9
435
81
4
994
27
12
16
42
1.85
10361--10386
12
2.2
12
100
0
52
15
42
15
26
1.87
12419--13470
441
2.4
445
79
7
1091
42
12
13
31
1.82
17070--17478
216
1.9
216
95
0
737
35
19
18
26
1.95
17695--17739
21
2.1
21
100
0
90
35
26
8
28
1.87
23034--23065
16
2.0
16
100
0
64
25
6
12
56
1.59
27103--27129
4
6.8
4
100
0
54
51
0
0
48
1.00
27562--27603
18
2.4
18
96
4
77
40
4
14
40
1.67
27562--27651
15
5.9
15
80
11
94
40
8
12
38
1.74
27560--27651
44
2.0
46
87
4
134
41
8
11
38
1.73
29212--29250
20
2.0
20
89
0
60
53
10
0
35
1.35
46012--46040
14
2.1
14
100
0
58
31
20
0
48
1.50
47907--48040
65
2.1
65
100
0
268
47
7
25
20
1.76
51607--51709
51
2.0
52
96
1
190
39
18
18
23
1.92
54775--54812
20
2.0
19
85
10
51
31
0
13
55
1.38
55601--55631
2
15.5
2
93
0
53
45
0
0
54
0.99
73653--73704
27
2.0
26
88
3
77
34
17
19
28
1.94
75902--75993
31
3.1
29
77
13
89
33
9
26
30
1.88
75906--76006
31
3.3
31
79
8
84
34
12
23
28
1.92

Tables:   1

The End!