Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010094.1 Corchorus capsularis cultivar CVL-1 contig10115, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15363

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
440--486
11
4.3
11
91
0
76
44
2
6
46
1.40
620--690
10
7.2
9
76
14
52
50
8
2
38
1.47
1399--1448
14
3.8
14
79
10
61
34
0
0
66
0.92
2275--2308
17
2.0
17
100
0
68
23
17
17
41
1.90
2754--2822
28
2.4
30
80
4
79
39
10
17
33
1.83
2754--2828
30
2.6
28
80
4
78
41
9
16
33
1.80
12689--12720
11
2.9
11
90
0
55
43
18
0
37
1.51
13832--14171
87
3.9
87
95
0
581
23
22
29
24
1.99

Tables:   1

The End!