Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010098.1 Corchorus capsularis cultivar CVL-1 contig10119, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  54573

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1055--1108
24
2.2
24
74
6
56
37
0
1
61
1.07
8091--8118
2
14.0
2
100
0
56
50
0
0
50
1.00
12021--12149
62
2.1
63
85
7
183
38
13
13
34
1.84
19331--19362
2
16.0
2
100
0
64
50
0
0
50
1.00
20623--20650
2
14.0
2
100
0
56
50
0
0
50
1.00
24118--24383
107
2.5
107
91
1
408
41
8
9
40
1.68
25945--25976
15
2.1
15
94
0
55
15
9
25
50
1.74
28036--28071
7
5.1
7
93
0
63
0
30
0
69
0.89
30602--30643
16
2.6
16
82
10
50
30
0
21
47
1.51
41775--41800
9
2.9
9
100
0
52
11
0
0
88
0.52
44337--44435
51
1.9
51
100
0
198
18
31
19
31
1.95

Tables:   1

The End!