Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010099.1 Corchorus capsularis cultivar CVL-1 contig10120, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33293

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2500--2566
29
2.5
27
73
15
68
65
7
11
14
1.45
2733--2770
19
2.1
19
85
5
51
42
0
21
36
1.53
3638--4024
193
2.0
196
94
1
690
48
12
15
24
1.79
9016--9049
6
5.5
6
96
3
59
32
0
50
17
1.47
22851--22891
17
2.4
17
84
8
57
21
19
21
36
1.95
27361--27768
204
2.0
206
91
2
669
33
13
19
33
1.91
29312--29707
200
2.0
202
88
2
589
33
14
19
32
1.92
30880--31294
206
2.0
205
91
0
677
32
13
20
33
1.92
32826--33237
203
2.0
203
89
2
630
32
14
20
32
1.93

Tables:   1

The End!