Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010102.1 Corchorus capsularis cultivar CVL-1 contig10123, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27722

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
145--211
31
2.2
31
92
5
111
20
17
11
49
1.79
429--508
33
2.6
29
78
9
79
43
13
20
22
1.86
9983--10039
24
2.4
24
82
8
64
50
3
40
5
1.42
16762--16820
24
2.5
24
75
13
59
76
6
15
1
1.07
16768--16819
18
2.8
18
83
11
61
76
7
13
1
1.07
16768--16820
19
2.8
19
82
2
63
77
7
13
1
1.06
16762--16822
22
2.8
21
76
13
68
77
6
14
1
1.05
25495--25651
74
2.1
74
88
2
235
21
27
9
42
1.83
27205--27233
2
15.0
2
92
7
51
48
0
0
51
1.00
27204--27230
13
2.1
13
100
0
54
44
0
0
55
0.99

Tables:   1

The End!