Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010105.1 Corchorus capsularis cultivar CVL-1 contig10126, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25629

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
312--419
54
2.0
54
91
7
175
38
13
6
40
1.71
960--988
2
14.5
2
100
0
58
51
0
0
48
1.00
6347--6492
38
3.8
38
88
1
204
21
35
20
22
1.96
6347--6492
77
1.9
75
85
2
202
21
35
20
22
1.96
6672--6705
15
2.2
16
89
5
52
50
8
0
41
1.34
7149--7231
40
2.0
41
90
2
132
56
2
10
30
1.46
10233--10271
9
4.3
9
83
0
51
53
0
2
43
1.14
12423--12455
15
2.2
15
94
0
57
33
21
27
18
1.96
25057--25095
9
4.3
9
83
0
51
53
0
2
43
1.14

Tables:   1

The End!