Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010108.1 Corchorus capsularis cultivar CVL-1 contig10129, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24174

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--53
2
26.5
2
100
0
106
0
49
0
50
1.00
287--1082
444
1.8
435
85
5
1003
29
14
14
41
1.86
1304--1408
32
3.1
35
63
18
85
25
5
19
49
1.70
2071--2124
27
2.0
28
85
10
76
48
5
3
42
1.44
3010--3077
22
3.1
22
84
0
91
39
17
11
30
1.86
3022--3400
22
17.4
22
71
12
158
36
16
9
37
1.81
3685--3804
60
2.0
62
86
5
172
44
5
14
36
1.67
3784--3903
27
4.5
25
69
18
73
49
4
8
38
1.52
3784--3886
27
3.9
27
70
14
79
50
3
8
36
1.52
3784--4030
128
2.0
127
90
2
390
48
4
8
39
1.53
3964--4033
27
2.6
27
82
11
72
47
4
7
41
1.50
5666--5764
49
2.0
49
86
0
135
26
20
14
39
1.90
10493--10575
30
3.0
27
69
22
80
45
8
12
33
1.71
13513--13586
35
2.1
36
87
7
107
56
16
6
20
1.62

Tables:   1

The End!