Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010109.1 Corchorus capsularis cultivar CVL-1 contig10130, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  31180

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1402--1662
129
2.0
129
99
0
513
33
9
16
39
1.82
3114--3140
2
13.5
2
100
0
54
48
0
0
51
1.00
27338--27425
45
1.9
47
81
9
110
37
15
12
34
1.86
27338--27593
22
11.7
21
71
17
98
35
15
11
36
1.84
27544--27593
20
2.5
20
96
0
91
28
18
10
44
1.81
27675--27824
22
6.8
22
69
12
94
34
14
10
41
1.79
27672--27824
66
2.3
66
80
4
175
34
15
9
40
1.80
27699--28218
22
23.8
21
67
15
120
35
17
10
36
1.84
28385--28422
19
2.0
20
85
15
53
63
2
5
28
1.30
29528--29623
38
2.6
37
75
3
111
53
11
18
16
1.73

Tables:   1

The End!