Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010111.1 Corchorus capsularis cultivar CVL-1 contig10132, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  30137

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
543--618
39
1.9
39
100
0
152
46
6
23
23
1.76
593--684
39
2.3
39
92
1
148
33
7
30
28
1.85
8940--8970
7
4.4
7
100
0
62
41
0
16
41
1.48
12150--12183
7
5.0
7
96
3
61
85
0
0
14
0.60
16244--16289
3
15.3
3
95
0
83
65
0
2
32
1.05
29855--30137
48
5.9
48
76
0
217
22
49
2
25
1.63
29872--30137
96
2.8
96
81
0
289
22
49
3
25
1.64

Tables:   1

The End!