Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010113.1 Corchorus capsularis cultivar CVL-1 contig10134, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7835

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1806--1847
21
2.0
21
95
0
75
19
30
33
16
1.94
1827--1920
33
2.8
33
82
3
100
20
38
29
11
1.88
2961--3058
32
3.0
32
80
7
117
31
26
19
22
1.98
3428--3504
32
2.4
32
95
0
136
22
25
23
28
1.99
3428--3525
32
3.0
32
87
1
88
23
25
23
27
2.00
3462--3959
220
2.3
219
89
2
750
20
27
25
27
1.99
5129--5183
24
2.3
24
96
0
101
32
25
25
16
1.96
5210--5299
27
3.3
27
84
6
128
20
43
17
18
1.88

Tables:   1

The End!