Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010117.1 Corchorus capsularis cultivar CVL-1 contig10138, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21178

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5909--5969
27
2.3
27
97
0
113
22
44
6
26
1.77
5917--6011
30
3.3
29
83
4
95
27
38
8
25
1.84
5933--6023
30
3.0
30
81
0
110
26
42
7
23
1.80
10071--10095
2
12.5
2
100
0
50
48
0
0
52
1.00
14045--14238
97
2.0
98
94
1
345
41
9
15
34
1.79
16513--16806
109
2.6
108
89
5
417
37
9
1
51
1.45
20239--21176
30
31.4
30
81
3
843
26
43
6
22
1.78
20516--20573
24
2.4
24
88
0
80
27
39
8
24
1.84

Tables:   1

The End!