Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010120.1 Corchorus capsularis cultivar CVL-1 contig10141, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21304

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4867--4945
28
2.9
27
86
5
104
17
13
25
43
1.86
6413--6439
6
4.5
6
100
0
54
55
14
0
29
1.40
6436--6470
13
2.7
13
95
0
61
60
8
11
20
1.57
7374--7398
10
2.5
10
100
0
50
24
8
20
48
1.76
11725--11780
28
2.0
28
82
6
69
16
17
7
58
1.59
15264--15319
3
18.7
3
100
0
112
67
0
0
32
0.91
16010--16044
15
2.4
14
90
4
52
80
2
17
0
0.84
17264--17304
15
2.7
15
79
20
50
80
0
19
0
0.71
18124--18626
69
7.3
69
84
2
467
26
26
19
27
1.99
18239--18626
139
2.8
137
83
3
440
26
27
19
27
1.99
18736--18973
47
5.0
47
89
0
359
19
22
21
36
1.95
19280--19358
28
2.9
27
86
5
104
17
13
25
43
1.86
20352--20393
16
2.6
16
84
0
57
47
21
21
9
1.79

Tables:   1

The End!