Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010125.1 Corchorus capsularis cultivar CVL-1 contig10146, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24564

Tables:   1   

This is table  1  of  1  ( 16 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9147--9324
89
2.0
89
97
0
338
48
19
7
24
1.74
10431--10482
26
2.0
26
85
11
70
53
1
7
36
1.41
15541--15575
17
2.0
18
88
5
54
60
0
25
14
1.35
16190--16252
22
2.9
22
76
9
65
30
12
7
49
1.69
16300--16353
22
2.5
22
81
6
65
37
18
12
31
1.89
16416--16513
23
4.3
23
81
10
76
37
18
7
36
1.78
16443--16511
23
2.9
25
85
6
90
39
18
2
39
1.66
16953--17182
22
10.5
22
70
10
148
33
14
9
41
1.79
16928--17121
44
4.4
43
75
6
124
36
13
9
40
1.77
16928--17092
88
1.9
88
82
5
208
36
13
9
40
1.77
17087--17146
21
2.7
21
84
10
66
35
15
8
41
1.77
17223--17263
22
1.9
22
95
5
75
48
19
4
26
1.69
17221--17270
22
2.4
21
83
6
66
48
16
8
28
1.74
19313--19398
22
4.0
21
74
7
82
37
16
10
36
1.83
20428--20491
31
2.1
31
85
5
87
45
4
23
26
1.72
22960--23039
28
2.8
28
84
5
97
36
11
25
27
1.90

Tables:   1

The End!