Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010136.1 Corchorus capsularis cultivar CVL-1 contig10157, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18190

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
62--104
18
2.4
17
81
11
50
58
13
0
27
1.37
290--327
18
2.1
19
90
5
60
42
26
5
26
1.76
1777--1998
109
2.0
109
90
0
345
27
19
21
31
1.97
4052--4080
13
2.1
14
93
6
51
58
13
0
27
1.36
4043--4085
23
1.9
22
95
4
77
58
11
0
30
1.34
4272--4309
18
2.1
19
90
5
60
42
26
5
26
1.76
10856--10905
19
2.7
18
79
11
57
10
8
16
66
1.44
18154--18189
2
18.0
2
100
0
72
50
0
0
50
1.00

Tables:   1

The End!