Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001014.1 Corchorus capsularis cultivar CVL-1 contig01014, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  1898

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
154--192
19
2.0
19
85
5
51
28
2
2
66
1.18
153--192
20
2.0
20
85
9
55
27
2
2
67
1.16
355--529
22
7.9
22
68
12
97
35
10
16
37
1.83
356--482
44
2.9
44
85
4
159
34
11
16
37
1.85
352--475
66
1.9
66
81
6
153
34
10
18
36
1.85
599--925
22
14.5
22
68
17
102
39
9
14
36
1.79
887--982
22
4.4
22
80
5
104
44
9
13
32
1.76
1100--1151
21
2.5
21
78
3
61
40
9
13
36
1.77
1357--1578
22
10.3
21
74
15
127
38
9
17
35
1.81
1357--1578
44
5.2
43
74
16
165
38
9
17
35
1.81
1452--1757
22
13.8
22
72
6
161
34
11
17
36
1.85
1452--1578
45
2.8
44
82
9
141
35
7
18
38
1.80
1739--1787
22
2.2
22
88
0
71
53
6
14
26
1.64

Tables:   1

The End!