Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010141.1 Corchorus capsularis cultivar CVL-1 contig10162, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7840

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
53--145
11
7.1
14
65
22
58
33
2
8
55
1.42
84--151
26
2.6
26
86
9
102
33
1
10
54
1.43
160--219
25
2.5
25
86
5
79
43
0
20
36
1.52
546--582
2
18.5
2
100
0
74
51
0
0
48
1.00
6132--6165
12
2.8
12
86
0
50
47
2
29
20
1.65
7376--7437
31
2.0
31
83
0
79
30
17
6
45
1.74

Tables:   1

The End!