Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010142.1 Corchorus capsularis cultivar CVL-1 contig10163, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29984

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2082--2164
41
2.0
41
100
0
166
32
16
21
28
1.96
8371--8396
2
13.0
2
100
0
52
50
0
0
50
1.00
12085--12361
110
2.5
109
90
5
414
48
2
11
37
1.51
14029--14065
19
1.9
19
94
0
65
45
0
21
32
1.52
16018--16057
20
2.0
21
85
14
57
52
5
22
20
1.65
20902--20995
45
2.1
44
88
5
136
29
12
24
32
1.92
23648--23687
15
2.5
15
88
8
53
40
0
0
60
0.97
24263--24294
16
2.0
16
100
0
64
43
12
25
18
1.85
26519--26663
73
2.0
74
94
1
256
48
15
20
14
1.80
27427--27461
16
2.2
16
94
0
61
42
17
28
11
1.83
28365--28432
27
2.5
27
88
4
93
54
5
20
19
1.64
29093--29127
18
1.9
18
94
0
61
14
54
5
25
1.62

Tables:   1

The End!