Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010145.1 Corchorus capsularis cultivar CVL-1 contig10166, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29814

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
221--328
33
3.3
33
92
6
168
11
35
40
12
1.79
5380--5413
2
17.0
2
100
0
68
50
0
0
50
1.00
5793--5838
23
2.0
23
91
0
74
15
32
19
32
1.93
5835--5877
22
2.0
22
86
4
61
51
32
0
16
1.45
6760--6851
46
2.0
46
83
8
116
35
13
18
32
1.89
8751--8793
20
2.2
20
86
0
59
13
23
18
44
1.86
9769--9819
25
2.0
25
92
0
84
35
17
33
13
1.89
15090--15117
13
2.2
13
100
0
56
21
42
17
17
1.89
23243--23330
41
2.1
41
100
0
176
29
23
21
25
1.99
23321--23397
39
2.0
39
97
0
145
31
28
14
25
1.95

Tables:   1

The End!