Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010148.1 Corchorus capsularis cultivar CVL-1 contig10169, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26129

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4789--4935
73
2.0
72
86
5
206
27
15
24
31
1.96
10714--10763
3
16.7
3
91
0
82
0
38
0
62
0.96
11764--11792
13
2.1
14
93
6
51
0
10
0
89
0.48
11764--11792
7
4.3
7
91
8
51
0
10
0
89
0.48
13203--13362
60
2.7
60
88
0
221
28
18
16
36
1.93
13264--13363
31
3.3
30
71
10
96
29
19
16
36
1.93
14028--14113
45
1.9
45
85
0
118
26
23
15
34
1.94
14306--14331
2
13.0
2
100
0
52
50
0
0
50
1.00
14792--14874
42
2.0
42
90
4
132
38
12
19
30
1.88
20765--20851
41
2.1
41
86
0
120
48
13
1
36
1.51
25561--25594
16
2.1
17
88
5
52
29
11
44
14
1.81

Tables:   1

The End!