Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010159.1 Corchorus capsularis cultivar CVL-1 contig10180, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40883

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3700--3752
16
3.3
16
81
7
63
45
28
13
13
1.80
4084--4256
94
1.8
94
89
0
274
32
34
15
17
1.91
6023--6050
2
14.0
2
100
0
56
50
0
0
50
1.00
8337--8435
33
2.9
34
82
7
114
26
20
28
25
1.99
9053--9082
2
15.0
2
100
0
60
50
0
0
50
1.00
31326--31397
31
2.4
30
84
11
85
41
31
12
13
1.82
36519--36604
43
2.0
43
97
0
163
18
38
23
19
1.93
37647--37729
42
2.0
42
87
0
121
32
19
10
37
1.86

Tables:   1

The End!