Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010160.1 Corchorus capsularis cultivar CVL-1 contig10181, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14892

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
660--696
7
5.3
7
86
0
56
13
24
13
48
1.78
660--703
21
2.1
21
86
0
61
15
25
11
47
1.79
9574--9635
30
2.1
30
96
0
115
46
0
8
45
1.32
10613--10691
27
2.9
27
92
1
122
15
18
25
40
1.90
12060--12091
13
2.5
13
100
0
64
31
25
28
15
1.96
13796--13858
33
1.9
33
90
6
101
31
4
20
42
1.73
14801--14892
39
2.4
38
90
3
141
53
6
10
29
1.61

Tables:   1

The End!