Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010163.1 Corchorus capsularis cultivar CVL-1 contig10184, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  20008

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
616--646
2
15.5
2
100
0
62
51
0
0
48
1.00
1087--1127
20
2.0
20
85
0
55
68
2
0
29
1.03
1101--1133
15
2.3
15
94
5
59
66
0
0
33
0.92
9968--10009
22
2.0
21
85
4
57
26
28
11
33
1.92
16318--16356
21
1.9
20
84
5
51
28
2
12
56
1.50
17954--18005
3
17.0
3
92
4
86
30
0
1
67
1.02
19769--19813
21
2.1
21
91
0
72
13
31
13
42
1.82

Tables:   1

The End!