Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010164.1 Corchorus capsularis cultivar CVL-1 contig10185, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15699

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
863--928
31
2.1
31
91
0
105
53
6
18
22
1.66
2888--2916
2
14.5
2
100
0
58
48
0
0
51
1.00
5000--5062
30
2.1
30
100
0
126
63
20
3
12
1.42
7015--7039
2
12.5
2
100
0
50
48
0
0
52
1.00
9943--9995
25
2.1
26
89
3
81
37
13
15
33
1.86
10299--10338
20
1.9
22
90
10
66
55
0
0
45
0.99
13597--13825
70
3.1
76
83
11
260
35
13
0
49
1.48
13606--13833
78
3.1
74
88
6
293
35
13
0
50
1.46
15598--15641
3
14.3
3
95
4
79
65
0
0
34
0.93

Tables:   1

The End!