Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010177.1 Corchorus capsularis cultivar CVL-1 contig10198, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7582

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
458--506
25
2.0
25
84
8
64
40
0
0
59
0.98
458--508
22
2.4
21
81
18
61
41
0
0
58
0.98
885--1207
167
1.9
167
85
2
443
39
17
13
30
1.88
1011--1799
323
2.4
322
92
1
1303
36
17
15
30
1.91
5507--5601
9
11.8
8
70
21
65
30
36
22
10
1.88
5483--5606
32
3.9
32
88
2
169
30
38
21
8
1.84
5483--5615
16
8.3
16
78
6
144
31
38
21
9
1.84
7192--7229
20
1.9
20
88
0
58
57
5
2
34
1.35
7236--7392
74
2.1
74
90
2
244
40
8
29
21
1.84
7475--7525
15
3.3
15
81
15
52
50
0
3
45
1.20

Tables:   1

The End!