Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010181.1 Corchorus capsularis cultivar CVL-1 contig10202, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7204

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3404--3476
28
2.6
28
91
0
110
43
28
12
15
1.82
4746--5329
22
27.1
22
68
14
179
53
5
20
21
1.65
4749--5229
127
3.8
126
87
4
684
52
5
21
20
1.66
4909--4947
20
2.0
20
85
10
53
51
5
20
23
1.67
5265--5317
23
2.4
22
80
3
61
64
3
11
20
1.42
5345--5451
39
2.7
39
75
4
117
57
4
23
14
1.55
5396--5425
11
2.9
10
90
9
51
70
0
20
10
1.16
5338--5457
38
3.2
37
79
8
113
57
4
24
14
1.54
5406--5524
53
2.2
55
83
10
165
52
2
24
20
1.58
5406--5503
27
3.7
26
76
15
110
56
2
23
18
1.52
5532--5586
27
2.1
26
82
3
65
56
3
20
20
1.57
5542--5593
27
2.0
27
88
3
79
51
3
21
23
1.63

Tables:   1

The End!