Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010208.1 Corchorus capsularis cultivar CVL-1 contig10229, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32570

Tables:   1   

This is table  1  of  1  ( 19 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2570--2654
42
2.0
42
90
0
134
22
8
23
45
1.79
3432--3517
33
2.7
30
79
11
100
39
20
22
17
1.92
5322--5379
28
2.1
28
96
0
107
41
0
18
39
1.51
9500--9530
2
15.5
2
100
0
62
48
0
0
51
1.00
18629--18695
33
2.0
34
91
2
109
37
5
17
38
1.75
19806--19942
31
4.4
31
83
0
148
32
26
23
17
1.96
19809--19942
62
2.2
62
83
0
169
32
26
23
17
1.97
22726--22790
34
1.9
34
90
0
103
50
9
6
33
1.59
22818--22842
6
4.2
6
100
0
50
84
0
16
0
0.63
29556--30098
22
25.0
21
68
12
199
36
14
9
39
1.79
29846--29924
23
3.5
22
77
6
79
39
12
5
43
1.65
30083--30150
19
3.5
19
83
2
82
26
19
10
44
1.82
30320--30450
22
5.8
23
74
11
103
36
10
9
42
1.73
30326--30425
44
2.3
43
80
11
114
37
11
10
42
1.74
30256--30618
22
16.3
22
67
19
89
34
14
10
40
1.80
30682--30822
22
6.3
22
76
10
74
39
18
9
32
1.84
30736--30798
22
2.9
22
92
0
99
34
15
14
34
1.88
30736--30821
22
3.9
22
86
3
84
36
17
12
33
1.88
31067--31107
14
3.0
14
85
3
57
46
0
9
43
1.36

Tables:   1

The End!