Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010209.1 Corchorus capsularis cultivar CVL-1 contig10230, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28637

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1809--1936
37
3.4
38
76
13
131
14
38
20
26
1.91
2441--2471
2
15.5
2
100
0
62
51
0
0
48
1.00
3069--3132
23
2.7
23
80
7
67
67
1
21
9
1.28
3629--3665
19
1.9
19
100
0
74
37
21
16
24
1.93
3602--3690
46
1.9
46
86
0
124
44
23
12
19
1.84
7693--7791
31
3.3
31
73
8
105
32
20
11
36
1.88
16236--16272
13
2.8
13
91
4
56
59
5
0
35
1.20
16446--16512
30
2.2
31
83
2
91
28
16
16
38
1.90
17117--17188
32
2.2
32
82
4
83
58
5
29
6
1.47
18632--18686
15
3.7
15
76
9
67
34
18
5
41
1.73
18630--18692
30
2.1
30
100
0
126
39
15
6
38
1.73
19045--19102
29
2.0
29
100
0
116
31
20
10
37
1.86
27244--28028
190
4.0
194
80
9
793
34
12
17
35
1.89
28360--28390
16
1.9
16
93
0
53
54
0
9
35
1.33

Tables:   1

The End!