Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010212.1 Corchorus capsularis cultivar CVL-1 contig10233, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19555

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2--39
2
19.5
2
94
5
69
50
0
0
50
1.00
2218--2324
53
2.0
53
96
0
196
42
10
6
40
1.65
4307--4426
26
4.6
26
90
8
199
34
0
10
55
1.33
4271--4426
52
3.0
52
90
4
210
34
0
9
55
1.37
4316--4416
11
8.1
11
76
23
94
34
0
9
55
1.33
5028--5057
6
5.2
6
96
4
53
0
0
13
86
0.57
7477--7513
19
2.0
19
89
5
58
64
0
0
35
0.94
12185--12219
2
18.0
2
88
5
54
54
0
0
45
0.99

Tables:   1

The End!