Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010214.1 Corchorus capsularis cultivar CVL-1 contig10235, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34389

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
69--117
15
3.2
15
74
5
53
38
34
6
20
1.77
3286--3530
124
2.0
123
80
6
282
51
2
10
35
1.47
4604--4830
109
2.1
109
95
2
404
48
1
11
38
1.50
4975--5021
2
23.5
2
82
8
60
46
0
6
46
1.28
6815--6868
27
2.0
27
92
0
90
38
12
7
40
1.72
16973--16997
2
12.5
2
100
0
50
48
0
0
52
1.00
17632--17674
14
3.1
14
83
6
52
67
0
2
30
1.03
18844--19159
166
1.9
165
90
3
510
36
16
17
30
1.91
22310--22510
99
2.1
99
85
7
261
36
16
5
40
1.74
27296--27331
15
2.4
14
86
13
54
83
0
16
0
0.65
34138--34173
3
11.3
3
94
5
54
61
0
0
38
0.96

Tables:   1

The End!