Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010215.1 Corchorus capsularis cultivar CVL-1 contig10236, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15519

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
302--408
31
3.5
31
71
14
114
33
20
19
26
1.97
306--465
60
2.7
60
92
0
248
33
20
19
26
1.96
302--465
31
5.4
30
66
16
88
32
20
19
26
1.97
500--660
60
2.7
60
87
1
243
27
18
17
36
1.93
3144--3180
18
2.1
18
89
0
56
29
48
18
2
1.62
3801--3868
33
2.1
33
91
0
109
20
26
8
44
1.81
4692--4757
23
2.9
23
80
17
75
30
33
10
25
1.90
9149--9173
9
2.8
9
100
0
50
20
80
0
0
0.72
13430--13505
37
2.1
37
100
0
152
22
18
18
40
1.91

Tables:   1

The End!