Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010231.1 Corchorus capsularis cultivar CVL-1 contig10252, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23374

Tables:   1   

This is table  1  of  1  ( 22 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
711--748
17
2.2
18
85
4
51
55
0
2
42
1.14
2321--3638
323
3.9
332
77
9
1175
37
15
14
32
1.88
4692--4825
69
2.0
69
93
1
234
47
3
5
43
1.43
4881--4923
21
2.1
21
86
4
61
62
6
9
20
1.48
5468--6024
22
25.6
22
68
12
174
35
14
10
39
1.81
5468--6439
44
22.5
44
69
13
369
35
16
9
39
1.81
5752--5963
104
2.0
106
81
7
254
34
15
8
41
1.77
5736--5987
126
2.0
127
82
2
310
34
15
9
40
1.79
6131--6359
22
10.5
22
72
9
146
33
15
10
41
1.80
6382--6436
22
2.5
23
80
11
62
38
18
5
38
1.74
6601--6709
22
5.0
21
81
5
101
36
18
11
33
1.86
6868--6910
19
2.2
20
84
16
54
62
2
6
27
1.33
7210--7276
31
2.1
32
83
10
93
47
4
14
32
1.65
7217--7282
31
2.1
31
88
5
98
48
4
18
28
1.67
9455--9531
22
3.5
22
76
16
72
41
3
0
54
1.19
9484--9532
25
2.0
25
84
8
64
40
0
0
59
0.98
12220--12285
2
34.0
2
74
17
59
42
3
1
53
1.25
17188--17223
18
1.9
19
88
5
56
22
16
22
38
1.93
18768--18962
78
2.7
70
81
12
255
38
12
0
48
1.42
18799--18968
78
2.2
78
97
0
322
37
14
0
48
1.44
21517--21549
2
16.5
2
100
0
66
51
0
0
48
1.00
22526--22617
41
2.2
42
98
1
177
13
33
20
32
1.91

Tables:   1

The End!