Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010233.1 Corchorus capsularis cultivar CVL-1 contig10254, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25991

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
560--594
13
2.6
14
90
4
54
31
5
17
45
1.71
885--972
45
2.0
45
90
0
140
28
21
15
34
1.94
3386--3591
51
4.0
51
92
0
322
21
18
30
29
1.97
3466--3598
27
5.1
27
63
15
84
18
17
31
32
1.94
3774--3808
3
11.7
3
100
0
70
0
0
65
34
0.93
6060--6089
2
15.0
2
92
0
51
46
0
3
50
1.18
6903--6983
15
5.6
15
76
8
87
8
8
55
27
1.59
6933--6989
15
4.2
12
77
18
51
7
10
52
29
1.62
6903--6989
42
2.1
42
86
4
122
9
9
54
27
1.63
6888--6983
30
3.2
30
82
5
97
9
9
56
25
1.61
18407--18449
19
2.3
18
84
15
52
27
11
16
44
1.82
21452--21543
46
2.0
47
95
2
168
31
14
11
42
1.82

Tables:   1

The End!