Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010239.1 Corchorus capsularis cultivar CVL-1 contig10260, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  19108

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
595--684
29
3.0
30
73
15
89
18
12
30
38
1.88
5037--5090
28
1.9
28
100
0
108
27
14
14
42
1.85
9252--9281
15
1.9
15
93
6
51
80
6
10
3
1.01
13302--13658
156
2.3
154
81
7
391
31
15
18
34
1.92
17856--17881
2
13.0
2
100
0
52
50
0
0
50
1.00
19008--19108
33
3.1
32
78
7
105
14
41
32
10
1.81

Tables:   1

The End!