Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010244.1 Corchorus capsularis cultivar CVL-1 contig10265, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13413

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
408--450
11
4.0
10
80
14
50
16
9
20
53
1.70
3269--3294
4
6.5
4
100
0
52
0
23
0
76
0.78
3560--3584
7
3.6
7
100
0
50
0
24
0
76
0.80
7755--7786
3
10.7
3
100
0
64
31
0
0
68
0.90
7788--7819
2
17.0
2
87
12
50
53
0
0
46
1.00
7963--8011
24
2.0
25
92
7
84
42
8
22
26
1.81
8976--9010
11
3.0
12
87
8
54
48
5
0
45
1.26
9541--9995
242
1.9
242
84
8
611
32
14
16
36
1.89
10022--10111
45
2.0
45
86
4
128
38
13
10
37
1.78

Tables:   1

The End!