Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010246.1 Corchorus capsularis cultivar CVL-1 contig10267, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13916

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1538--1578
2
20.5
2
85
9
57
46
2
2
48
1.28
6466--6503
15
2.4
17
78
13
53
65
0
2
31
1.06
6584--6634
21
2.4
21
80
6
59
25
19
9
45
1.81
7026--7069
19
2.3
19
88
7
63
77
15
4
2
1.04
8954--8982
12
2.5
12
94
5
51
51
27
13
6
1.66
10449--10525
32
2.4
32
91
2
109
12
37
35
14
1.84
10458--10525
32
2.1
32
97
0
127
13
36
33
16
1.87

Tables:   1

The End!