Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010253.1 Corchorus capsularis cultivar CVL-1 contig10274, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  24871

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1830--1854
2
12.5
2
100
0
50
48
0
0
52
1.00
6662--6714
3
18.3
3
92
7
92
66
0
0
33
0.92
6670--6710
20
2.0
20
100
0
82
65
0
0
34
0.93
6662--6717
23
2.5
23
97
2
105
66
0
0
33
0.92
10484--10535
25
2.1
25
100
0
104
40
28
7
23
1.82
12235--12307
33
2.2
33
97
0
137
28
21
8
41
1.82
20160--20535
22
17.4
21
74
10
233
36
13
15
33
1.87
20171--20426
65
3.9
65
76
8
182
37
13
16
33
1.87
20160--20536
44
8.7
44
71
9
258
36
13
15
33
1.87
21600--21628
2
14.5
2
100
0
58
48
0
0
51
1.00
23354--24837
334
4.5
329
79
6
1358
34
13
14
36
1.87
23459--24837
660
2.1
661
80
6
1486
34
13
14
36
1.86

Tables:   1

The End!