Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010254.1 Corchorus capsularis cultivar CVL-1 contig10275, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  45020

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1455--1481
1
27.0
1
100
0
54
0
0
0
100
0.00
7192--7245
25
2.1
26
89
3
83
25
7
1
64
1.30
13257--13308
26
2.0
26
88
0
77
42
7
5
44
1.57
14347--14399
26
2.1
26
89
3
81
33
18
9
37
1.83
27187--27283
48
2.0
48
93
0
167
23
10
16
49
1.76
31500--31598
49
2.1
47
86
7
137
31
5
4
59
1.37
31649--31695
23
2.0
23
87
0
67
53
14
17
14
1.74
34192--34307
53
2.2
52
95
1
205
33
14
6
44
1.72
34971--35035
31
2.1
31
94
0
112
43
21
13
21
1.87
35242--35275
2
17.0
2
100
0
68
50
0
0
50
1.00
37763--37824
28
2.2
29
88
2
90
16
20
19
43
1.88

Tables:   1

The End!