Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010261.1 Corchorus capsularis cultivar CVL-1 contig10282, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  28484

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2526--2578
16
3.2
16
76
13
54
47
0
3
49
1.19
2839--2884
16
2.8
17
75
21
53
47
0
2
50
1.13
11682--11755
38
1.9
38
97
0
139
24
20
18
36
1.95
11859--12225
201
1.8
204
85
4
519
34
14
15
34
1.89
12753--12786
18
1.9
17
94
5
59
35
0
0
64
0.94
17002--17052
23
2.2
24
82
10
61
35
5
3
54
1.43
17148--17200
26
2.0
26
96
0
97
52
7
20
18
1.69
27219--27251
11
3.0
11
100
0
66
27
9
0
63
1.24

Tables:   1

The End!