Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010265.1 Corchorus capsularis cultivar CVL-1 contig10286, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  57831

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2797--2824
9
3.1
9
100
0
56
35
10
42
10
1.74
5691--5753
27
2.3
26
83
5
81
55
9
26
7
1.59
11529--11573
19
2.4
19
92
0
72
28
0
20
51
1.48
11696--11843
37
3.9
37
80
4
161
24
19
33
22
1.97
12512--12556
3
15.0
3
95
0
81
64
0
2
33
1.06
16274--16368
50
1.9
49
97
2
181
37
10
25
26
1.88
20871--20907
18
2.0
19
89
5
58
18
29
8
43
1.79
32694--32746
22
2.4
22
87
0
70
52
3
11
32
1.55
32781--32861
22
3.7
22
75
3
83
44
12
13
29
1.80
32783--32864
43
1.9
43
87
0
119
45
12
10
31
1.76
32937--32992
22
2.5
22
85
2
76
35
12
8
42
1.74
46904--47216
154
2.0
156
86
3
434
27
14
16
41
1.87
52563--52732
88
2.0
86
91
2
277
25
12
16
45
1.82

Tables:   1

The End!