Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010266.1 Corchorus capsularis cultivar CVL-1 contig10287, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  9064

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1743--1959
22
9.8
22
66
9
66
35
13
11
40
1.80
2004--2113
23
4.8
24
76
8
77
39
15
8
37
1.77
2009--2113
45
2.3
46
80
4
115
40
14
8
37
1.76
2165--2305
22
6.3
22
67
16
67
34
14
10
41
1.80
2297--2363
19
3.5
19
87
2
98
23
22
11
41
1.87
2471--2663
66
2.9
66
79
8
203
35
11
9
43
1.74
2446--2612
88
1.9
88
85
4
230
34
12
10
42
1.77
2446--2833
22
17.5
22
69
14
183
35
13
10
41
1.78
2897--3036
22
6.3
22
73
9
77
39
18
8
33
1.81
3314--3378
30
2.1
31
94
2
114
47
4
20
27
1.69
5340--5622
154
1.8
155
85
6
399
26
14
17
42
1.87
5340--5655
154
2.0
156
83
6
397
26
15
16
41
1.88

Tables:   1

The End!