Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010270.1 Corchorus capsularis cultivar CVL-1 contig10291, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  78901

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15713--15738
1
26.0
1
100
0
52
100
0
0
0
0.00
20249--20290
12
3.3
13
84
12
52
71
4
7
16
1.26
20760--20830
29
2.4
29
86
6
99
42
18
18
21
1.90
26543--26604
30
2.1
30
87
0
88
25
16
22
35
1.94
48568--48592
13
1.9
13
100
0
50
88
0
0
12
0.53
49251--49310
31
1.9
31
83
6
77
36
18
23
21
1.95
50935--50975
18
2.3
18
91
4
66
26
14
17
41
1.88
62961--62992
2
16.0
2
100
0
64
50
0
0
50
1.00
76858--76957
34
2.8
35
77
13
114
26
11
15
48
1.77
76987--77017
16
1.9
16
93
0
53
67
3
0
29
1.06
77272--77306
2
18.0
2
94
5
63
48
0
0
51
1.00
78352--78397
22
2.0
23
87
4
67
13
13
17
56
1.67
78610--78668
29
2.0
29
86
6
82
25
11
6
55
1.60
78862--78901
2
20.5
2
94
5
73
50
0
0
50
1.00

Tables:   1

The End!