Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010271.1 Corchorus capsularis cultivar CVL-1 contig10292, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17748

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2354--2418
30
2.1
31
85
2
87
30
18
3
47
1.64
2364--2425
30
2.0
31
84
6
81
33
16
3
46
1.63
2444--2494
15
3.6
15
69
15
54
31
9
0
58
1.30
2444--2501
15
4.1
15
69
13
50
32
8
1
56
1.40
3095--3133
20
2.0
20
85
10
53
33
5
2
58
1.33
3266--3319
22
2.5
22
85
8
67
38
5
16
38
1.72
3342--3487
22
6.6
22
69
16
81
43
10
13
33
1.77
3405--3896
22
22.5
22
67
12
147
40
9
14
35
1.79
3645--3896
66
3.8
66
74
6
208
40
9
15
34
1.80
3664--4032
22
16.7
22
70
12
132
38
10
15
36
1.81
15824--15848
2
12.5
2
100
0
50
0
0
48
52
1.00

Tables:   1

The End!