Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010273.1 Corchorus capsularis cultivar CVL-1 contig10294, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14577

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1299--1357
22
2.8
21
89
7
84
50
5
22
22
1.68
1350--1553
55
3.7
55
84
4
277
50
6
18
24
1.71
1366--1501
26
5.0
26
65
16
87
51
6
17
24
1.69
1522--1576
18
3.2
17
75
14
60
47
7
18
27
1.74
1830--2197
22
16.8
22
72
17
225
54
5
21
18
1.64
1830--2188
65
5.5
64
73
15
218
54
5
21
18
1.64
2180--2219
16
2.6
16
88
4
64
55
7
17
20
1.66
2222--2311
21
4.3
21
77
8
94
52
8
20
18
1.72
2229--2312
42
2.0
43
88
2
125
50
9
21
19
1.75
2376--2438
27
2.3
28
78
5
85
60
0
22
17
1.36
2383--2446
27
2.2
28
81
10
85
60
0
23
15
1.34
7503--7540
11
3.5
11
85
7
51
15
0
2
81
0.80
8557--8653
30
3.1
31
87
8
144
8
26
40
24
1.83
9559--9590
15
2.1
15
94
0
55
15
9
6
68
1.36

Tables:   1

The End!