Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010277.1 Corchorus capsularis cultivar CVL-1 contig10298, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  53143

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
15894--15950
21
2.7
21
94
0
105
26
40
19
14
1.89
19597--19817
117
1.9
117
88
3
338
32
14
33
18
1.92
24878--25051
92
1.9
92
82
5
219
42
12
8
37
1.72
25230--25266
11
3.2
12
92
7
60
8
5
0
86
0.70
25230--25271
12
3.7
11
87
12
59
9
9
0
80
0.89
33357--33397
21
2.0
21
90
0
64
29
26
7
36
1.83
36622--36670
22
2.3
21
86
6
71
81
0
10
8
0.87
36633--36672
16
2.4
16
84
15
55
82
0
10
7
0.84
36633--36672
17
2.4
17
88
12
57
82
0
10
7
0.84
39070--39312
128
1.9
129
81
4
301
33
16
12
37
1.87
45546--45627
33
2.5
33
89
0
128
42
24
10
21
1.85
49370--49400
16
1.9
16
100
0
62
32
12
12
41
1.81
49747--49780
8
4.1
8
85
7
50
58
14
2
23
1.50
49853--49878
10
2.6
10
100
0
52
88
0
0
11
0.52
51432--51457
9
2.9
9
100
0
52
34
11
42
11
1.77

Tables:   1

The End!