Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010278.1 Corchorus capsularis cultivar CVL-1 contig10299, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15111

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4293--4399
33
3.2
33
86
2
144
22
38
28
10
1.87
5169--5271
36
3.1
36
70
25
116
30
14
24
31
1.95
5203--5252
14
3.6
14
100
0
100
34
16
20
30
1.94
5893--5920
11
2.5
11
100
0
56
82
0
0
17
0.68
10086--10337
56
4.4
56
89
4
337
34
13
25
26
1.93
10632--10710
27
2.8
29
84
7
108
17
22
22
36
1.95
13554--13757
49
4.2
48
82
10
229
40
6
18
34
1.77
13585--13777
97
2.0
98
85
8
268
38
6
19
36
1.77
13583--13816
49
4.7
50
81
7
210
38
5
19
35
1.77
13583--13869
49
5.7
51
77
9
200
38
5
18
36
1.76
14644--14948
55
5.6
54
94
2
490
49
6
18
25
1.72
14865--14951
26
3.3
26
70
17
72
49
8
18
24
1.74
14911--15024
34
3.3
33
75
17
106
49
7
15
28
1.71
14930--15035
34
3.0
36
76
18
139
50
4
16
29
1.65

Tables:   1

The End!