Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01010279.1 Corchorus capsularis cultivar CVL-1 contig10300, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  13123

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
184--238
27
2.0
27
83
13
69
50
5
23
20
1.68
251--341
26
3.3
26
70
19
76
62
1
17
18
1.39
253--341
28
3.1
27
69
20
74
64
1
16
17
1.36
205--296
46
2.0
48
82
8
118
57
3
22
16
1.53
317--358
17
2.5
17
85
11
59
57
2
16
23
1.51
320--358
18
2.2
18
90
4
62
58
2
15
23
1.49
7827--7876
3
17.0
3
80
12
59
68
0
28
4
1.08
11345--11460
33
3.5
33
80
9
128
25
40
25
8
1.84
12354--12390
8
4.5
8
86
6
56
54
16
2
27
1.56

Tables:   1

The End!