Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001028.1 Corchorus capsularis cultivar CVL-1 contig01028, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  17626

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2842--2871
6
5.0
6
100
0
60
16
16
16
50
1.79
4955--4995
15
2.7
15
79
20
50
43
2
2
51
1.28
5187--5214
6
4.7
6
100
0
56
14
53
14
17
1.73
6456--6490
2
18.5
2
88
11
56
48
0
0
51
1.00
7623--7651
2
14.5
2
100
0
58
51
0
0
48
1.00
10632--10815
92
2.0
92
100
0
368
29
17
17
35
1.93

Tables:   1

The End!